Well

ome_zarr_models.v05.well.Well

Bases: BaseGroupv05[WellAttrs]

An OME-Zarr well dataset.

Attributes:

Name	Type	Description
zarr_format	Literal[3]
node_type	Literal['group']
attributes	BaseZarrAttrs[WellAttrs]
members	Mapping[str, GroupSpec | ArraySpec] | None

from_zarr

from_zarr(group: Group) -> Self

Create an OME-Zarr well model from a zarr.Group.

Parameters:

Name	Type	Description	Default
group	Group	A Zarr group that has valid OME-Zarr well metadata.	required

ome_zarr_models.v05.well.WellAttrs

Bases: BaseOMEAttrs

Attributes for a well.

Attributes:

Name	Type	Description
version	Literal['0.5']
well	WellMeta

Other types

ome_zarr_models.v05.well_types.WellImage

Bases: BaseAttrs

A single image within a well.

Attributes:

Name	Type	Description
path	str
acquisition	int | None	A unique identifier within the context of the plate

ome_zarr_models.v05.well_types.WellMeta

Bases: WellMeta

Metadata for a single well.

Attributes:

Name	Type	Description
images	list[WellImage]	Images within a well
version	Literal['0.5'] | None	Version of the well specification